YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49070108, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSINWNAPI SLDSQLMALT RSSHRSIPLI NTLTLSRRTL LGTGAIVACI AAISSGHLHT  60
   61 ISATRASSSA AAPFKSHLRL FSSSPATAFK MGSTASSRSA PESFPKGMSD SEWRTKLNPE 120
  121 QFRILREKGT EMAGTGKYNK HYPKDGVYTC AGCDSPLYKA TTKFDSGCGW PAFFDAIPGA 180
  181 IDRHSDRSWG MERIEITCKN CGGHLGHVFK GEGFNTPTNE RHCVNSVSIN FDKDEAKI

Type	Start	End	Confidence
Cytoplasmic	1	38	0.76
Transmembrane Helix	39	59	0.78
Non-Cytoplasmic	60	238	0.92