YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49072162, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNSLLVTL VRHGESQDNH QGIWAGFRDT PLTTNGINQA RALGQSFANV PLTAIYCSDL  60
   61 KRAAMTADEI LKSNRSIPPP PLVQSKSLRE INFGQAEGQS YAHTEWMQGS IGHDARNFRF 120
  121 PEGESLEEVN ARIAKAVRQF ILPRIEALRR KPPTHSAAVG DVIHICIVAH GIAIAELLRV 180
  181 FMALHDGSAS EAWPDPKSSY QRVRLDNTGW SRLELAVPFQ SDDEQLAVPA PTFTAESHPN 240
  241 PTASTSQPGP PSSSRPGAQS EYNDFGEIQA DLVERPVDAT SKMASKPALT PSESAARPVY 300
  301 VRILCQNQTD HLRGFNAQQG SVSSSAKTVA HLAGGGGTPK PSTGSGSASA ATMTNQSAMA 360
  361 ASAATVGIPP SVTLASISSN ATSSNAHPNT SLSPSTPAPG ASGSSNGASK NSMTTPASTR 420
  421 SLSSYDARMM ARELERAGAA SMLAGSEAGS MAGSTGYHAS STCVSALASD RQGSVGGYTV 480
  481 GSGASSTPSG ALDRGSFPSS PGVGGSMGAP HTSGAQLGGP YCQGTPGGLA GATSPNPAGV 540
  541 GIPVGPGTWS DTWQMICIRV LPLFNGEALR TSIEELNEMV SLHVRKTLDR GQAHAIESLT 600
  601 LDLMSLTSTG TLTLNSKLQA LEDTRLLLRL VEVWTFFLGQ VLPYCEACFL PLQTDPTLRS 660
  661 LIAASASYNE AAAGGTGGNG AGPFSSSTNL TQSGAAAILS SAGSVHADLQ RIDVRKIVLI 720
  721 VFRDQVLMPI YERLLYLFAH LTELDPSFSA SEETSNTAGG GDDGIKQVSL RLLQMTSVLA 780
  781 SILSDDEAQD AMDNLLRALR LGSKSASAGR IRGAGEGQGV GGTSPTHKNH RRGWMAQKAR 840
  841 KHGAALGLEA DGSVFGSTSG LPTFSQMSHD GFGNGTHRPV LTRPSQLTSL RDALGARFGP 900
  901 EMTEDEYLSS LRSPAGSPAI STGGQPEASF TSVVEQKPSR LGADKRAAQM RTADDDSDST 960
  961 PMAAARNGLA ASLDTHEGEP AVATTALAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle