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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71019721, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNSFSSQTV RPSDASPSYE ATQSAQQQDR DAAPRTPPSS GQNFQAFNGR QVAPSSNTTV  60
   61 NPASSRSFQP SHGHSQSTSV LLNSSSSSRP MFRPQPQQNP SVSNRSGSMR PMSAFQPLDN 120
  121 PEYYASGGGS SPTATATATA THRPPSPAGS TARSIRSTPQ TPLTFKSQDL RSALSLQESQ 180
  181 QKKLYMEGYL LKRDDLGTDG KPLHVADEKR RWSECFVQLS GTVLSLWNVD QMQEAAKRGS 240
  241 EVPPTYINIT DSFVDFIGLL IEDPKLIPAS RGRYHHAFAI NSAGNNRTIF CFRDPPPFPP 300
  301 ESLEQWLAPE HRHKPEHRTV IGWLNLGHRH LQAWINAIRL ASWEKVRLEE IYTGALIRAR 360
  361 LGAVGSPGSA NPDTVKDASA ASAAEMSIKS PLVKGKMEGW VKARFMGSTE WKKVWMVLTD 420
  421 HKPDESEFGA KKKFWKIGSS TGDRSSILSV NSVSTSAPGA PTNDGKDLPP PPGSNGAPGV 480
  481 ASFFESKKDK KPFASLIYAA HAFAVYPSRP ELVEGSSLFK VEGVFPSSSV LSATHRVRST 540
  541 GWVMLMPELE TPSSKGANAE MMKWLIAFMD SFKLYGRPET FVWEARDPTS PFFAYPIGPF 600
  601 KDRLFLDREL AEFLEIARED HLTTRSSLHG IMAARMRGER TKILQPLPPP SQNALASTQD 660
  661 ALSRDADEPR TSSRASAAES ASQLPPLDFA SNQGQPPATG ASMAQSGSDQ IDRVSQAFRD 720
  721 PARADAADAE STKGASPESE SIRPSRDAVA VPSGSLQPTM QDAAPTQTAQ APASTKSVPV 780
  781 VTAPVSNTVT ASNPAPAPAI VAKQSSTTPY SRDQQGESSS LQALASPSTS APPPMHGVPP 840
  841 VQQTVPATES SLAYLAPSDK SQAMSPSSET SATRPPAVFG PSGRGAEQNI VDQPRSTKRD 900
  901 SDLPTNYDES ALFYMASISD QLPATTPQPV VMPAPSRHVV TKESSQASRP QSLAPASGTT 960
  961 STVQSESTHA TRLSSDHQKS ASAAPVQAEQ VKPEVSAVPR VNPTQDDTIN DDALAAYSFL1020
 1021 EQPPSPLVRT NEMSAKPVAA DRSAVPLTAS SAVPVQPGSD TVPQTSVDST HSARPAAVQY1080
 1081 PSTFGQNKRA AERKSAAQLQ AQAHQEALSR PGRAGVTKPK GIRRPGWVDD SEEEEDDEEE1140
 1141 EDEEDESRED ARSISRPLPS AGTVRSAASS NRGGAGTESP VNLADSVGSL GRNNDAASQV1200
 1201 AGANFPRSIS GYGASLLDGS RATSPGRSPG RGGAPTHPSI QAYQRQSMFN NHLSAAHGDD1260
 1261 SRSNTPPQGP IVRDRQTFLQ LKPEEQPGAM TTVFTPHGLV QAGAQDKAER SAKAQEAEAR1320
 1321 AMGSHMVNVP NKPPPPQAGL LGAITAHERD RKGAGGFGAT LTERERERVA AERRQREEDA1380
 1381 LRQQQQQQQM QQMQQMAYFN PMLYQQMMMS GMMGGMGGMG GMGMMGMGMP QMGAFGASQV1440
 1441 GAGSQIGGMG GGFDPMMAQQ QAMQAAQMAY MSALSQAHQE GSALGHGSMM GHGSPGAAPG1500
 1501 STMGMPMGSM QFMTSPHMSM MGAPFPGFMT QSAAGGIPSE FGGVGGASPS PRPSSTKPNG1560
 1561 QGNT

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