YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71023615, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVTNLGSS LRTATSSISI ASGPSCSSTA ARAFSISVRV NAKPRKQRNA DDPMSLRRMP  60
   61 KFNYDDVPSL GHQILQRKRE LLKVMRTVEF EIPKLAKFRQ AYTPPKPEQC LQFRFQHYQG 120
  121 ENHPASRKVV LTVNVDELVK VGAVKDTPSK HKLLLLAGSR FHPKSNAAAK QGEGVIKISC 180
  181 ELFPNERQNM KWCSDTLDAL VKEANVRTKE VDDLPLDLRP FLVRQDKKRH YLRADRPSLK 240
  241 DFPKEWL

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	247	0.99