YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49648586, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRRLTGSQS ESSIYGLVND SQTSMGTMDY ANELASQLDM LLKKDKPLST DDSASVASSS  60
   61 AASRTSWLGP SIPRHSRHFV DALYDKVILP KLKKSIIGDV DSDLGSAVAT PTGSGSRRGS 120
  121 FSTIRALDIS EEPFSESDIS VFDDSVSVAS TASSEPFRIS QHNPPKPVFD PEAHEAGPEL 180
  181 SIPLLLRNIA ELSKRAGGVM KTQTVVLKAI QWQNPCLSIS CIFIYTAMCL YPGIVFVLPG 240
  241 LLFMYGIMAP AYAEKHPLPK EYRPSPWTVK NEFDMAADDD TSIRAAQIKR IKAAEKKPVD 300
  301 VKKSMKNFQN ATTNLIKALD KLESFLSGPA GFANESLSAL IFLLIGFAMI GTFFLSAFIP 360
  361 WKALQIGAGW GVIIAGHPTL LKRIVAILDE LEKSDDEEKP KESPVIAILQ KVQKKEFIND 420
  421 EPPQGETVEI FELQRQGLTP RQWDSWVFTS LVYDLGSSWR QAKKRPPGAP FLGDVEAPEG 480
  481 WLFSKMHDWE VDMNPNEWVG ERGLGRCTEM DNDEWVYDVE KGVRGEWRRR RFIRTAFKES 540
  541 TVPKELLGLV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle