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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47565158, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWNWLRKKK KLNTTEKNET DNSEQQPNNQ EDDNKKQTRS MKHNKDSNGE QKKEEHKESS  60
   61 RDKQQDKSVQ NQQQHSKQDN SEQNQQQHSK QNNSDQGQQQ HSKQDKSEQG QQQHSKQDNS 120
  121 EQDQQQHSKQ DKSEQDQQQH SKQDNSEQDQ QQHSKQDNSE QNQQQHSKQN NSDQGQQQQN 180
  181 AKGNSIYDFT KPEKDRIHSL QDLIEKLKKS SDFVNYHTSD DETMPYWISY YRPSLDGEKL 240
  241 QKYLMPTLLE RPNASLEELK EHIPMSGITI TNDLQKIEDM VLKGHAIVQV NQQDQKCMLA 300
  301 NIAIDNYRAP TPPLNESTVI GPQEGFVEDI DTNINLVRKR LPVLDLQTKE MIVGEFSKTK 360
  361 VVMMYLDNLA EKDNVDFLEE SLRALEYDQI NDSAYIQELM GEKSIFPLYI NTERTDRVTK 420
  421 ALIDGKIAIF VDGSPSVLLT PVSYFDFFIS PEDYNVSWMY ATFSRVLRLI AVLFSICATP 480
  481 LYVAVLNYHY ELIPSDLLET LILSRAQVPF PPLIEALFLE LAIDLLREAG ARLPMKVGQT 540
  541 LGIVGGIVIG QASVQAGLTS NILLIIVALS ALASFITPIY KMGNAVRLLR FPFLMFAEIG 600
  601 GLFGISLGFI FLFTHLFRLT SLRKPYALFY PTRQQSVKDS WIRFPLTMID TRDVQARPQH 660
  661 VKKSAKGIST KHKSDFDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle