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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47555448, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGFYNVLA ASIVFSMVTV PNYSYANELE KTVTVSSGEQ ALKSIENHMK DEDGRGEDKG  60
   61 VRNEVQGEFL VHIVKEVPLY DSSNFQKETG VRISNQVVKA EKRKGNAYYV QTSSGTGWIQ 120
  121 NSDGNVEVKE IHPLLSEKLV INEESSTYSE PFTSYKEENV LEPQTIQAIG QAGEWFQVKI 180
  181 NNEMKWIHSP SAKFEGTKAS LIQDAAPTRT KRAAAMYAAP IEEKTTDIYG VPLKEMIVPK 240
  241 GNENIRPGYA MKPKYITIHE TDNYSVGANA RNHAIYLYNQ ATGTEDRSAS WHFTVDDKEI 300
  301 YQHLPLNENA WHAGDGAEGT GNRESIAIEI AVNEDGDYNK AVENARKLAA YLMGELNIPL 360
  361 ENVKKHQFWS GKNCPAIMIK NNAWEPFLQG TKVYYDANHK DDITGGWYEA DIRELDKRGI 420
  421 MVGDGKGSYW PERLVTRGEF ANLISRSLQL PEGSSNFSDL NTAHPSLIDG INRAASAGII 480
  481 NGRGNGTFAP NDTIKRDEAV IMIDRALQYK KIKGKLVSLP FSDQDLAYDK QAVQRVYGLG 540
  541 IVKGNDNNEF MPKGSATRGE SAAFINRMLK VIESK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle