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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47552687, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LITRTSFDLK LESFMQEFIL FLSPLAASLL LVGLALFAKG KKRNYIALGI NFILTIVLVG  60
   61 NVMFYGFYND FVTLPVLGQT SNFGSLGSSV KELFNYKIIL AFADIIVFFI LLKKMKNFAP 120
  121 TERVARPMRS LYFVSTIAIF FANLGLAEAE RPELLTRSFD RVMLVKNLGL YVHQVYDLGL 180
  181 QAKSSSQKAF ADGSKLQETE NYVKTTQSKP DPNMFGTAKG KNVIVVSLES LQTFLIGATV 240
  241 NGQEVTPFLN QFTKESYYFD NFFHQTGQGK TSDAEFLVDT SMYPLDRGAV FFTHGNNEYT 300
  301 ATPEILRQQG YYTAVFHANN ATFWNRNIMY PALGYDRYYN ELDYKITPET KLNWGLKDIE 360
  361 YFDQSVDMLK QVKQPFYTRF LTLTNHYPFT YDDNTKLIDE YNSGDGVFDR YMVTARYLDE 420
  421 AMKHFIERLK AEGIYDNSVI VFYGDHYGIS ENHNRAMAQF LGKEEITAFD HMNLQKTPMF 480
  481 IHVPGQKEGK TISKPTGEID IKPTILNLLG VDSTNDVRFG HDVFSPDNKG FVVLRDGSFV 540
  541 TDKYMYTNST FYDRTTGEVV QLPKEESQPL IDRAQNELNM SDKIIEGDLL RFSESNKIKT 600
  601 GEVKTAIKEE KKSAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle