YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|93354493, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGLESKGR QYAFMFLTAL AVAGCGKQEA KGPAAPPVTE VGVVKVDLHD VPVAFEFVGQ  60
   61 TESSQQVEIR ARVNGFLEQR LYTEGTMVKA GQVLFRMDQK PFKAALDAAM AELAQQQARL 120
  121 TTARQNLARV RPLAAKNALS QKDLDDSVGQ EQGAAAAVEQ AKANVTNARL NLDYTTITAP 180
  181 VSGLSSYAKK QVGSYIDASN SLLTYVAKLD PIWVNFSLSE NEVLQYQSQQ ASGQLKMPPR 240
  241 GSMEVEIVLA DGATYGKRGH ITFADASFSS ETGTYLLRAE FPNTEGALRP GQFVRVRVLG 300
  301 AERTRAITVP QAAVVQGQRG QFVWTVGKDN KAETRVVDVG EWAQGNWIIR SGLREGDTVV 360
  361 VDGTVRLAPG APLKPVAAPP QPVSTERPPG SPGAAPTPAS APTAAPEKGA TS

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	412	0.99