YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48786861, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRKLGNSQ LEVSAIGLGC MGLSHGYGPA MDRPAAIALI RAAVDRGVTF FDTAEVYGPW  60
   61 LNEEVVGEAL APTRDKVVIA TKFGFTFGDD NRQQILNSRP DHIRWAVEGS LKRLRTDVID 120
  121 LLYQHRVDPE VPIEDVAGTV RDLIAEGKVK HFGLSEAGAQ TICRAHAVQP VTAVQSEYSL 180
  181 WWREPETEIL PTLEELGIGF VPFSPLGKGF LTGAIKEGTT FGSDDFRSIV PRFSQEALQA 240
  241 NQTLVDLLGQ IAMDKGVTSA QIALAWLLAQ KPWIVPIPGT TKLHRLEENL GAASVELSGD 300
  301 DLRTITRALE QVEVQGDRYP AALQARVGR

Type	Start	End	Confidence
Signal Peptide	1	26	0.68
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	329	0.99