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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IZUM1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHFTLLLA ALANCLCPAR LCIICDPFVV AAIKTLEQNY LPTHLAPEHH EDVMKRVEQE  60
   61 VRNFADLPLN QNTFLGVVDE DTLEQASWSF LKDLKRITDS DVKGELFVKE LFWMLRLQKD 120
  121 IFATLVARFQ KEVYCPNQCG TMSQTLIWCN KCEKQMHFCR KSMDCGERQI EVHRLEDMVL 180
  181 DCQLSWHHAS EGLTDYSFYR VWGNSSETLM SKGKEPYLTK TMVGPEDAGN YRCELDTVNA 240
  241 GPATIIYYHV TVLPPRSVEE KPPPNIVTQE EEETPVQVIV PTLEPEPEPE PIPTVTHRPE 300
  301 KKLKSRLLIL LILGFVVLVA SVIASVLHFR KTRVKSKNSN VENKTSAAEF KSEAESPQKM 360
  361 GSRKLSQAEF HTDSSDKVEE ADN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle