YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48857189, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKRKILPL LTALILIFAF SSCNKNNKNG PTDGAGDNNN GYSVTLKDSY DREVNLDKEP  60
   61 ERIVSVAPNI TEIIFALGKQ DKLVGRTDFC DYPEEAKNIE SIGNIDQPNV EKIVELQPDV 120
  121 VIASSIFTKE MLQKLEEANI KVAIFQAEKD FEGVYNMIEK IGLLLNAREE AKNVVTEMKE 180
  181 KIEFVKSKVD GLEKPSVYYV LGYGEFGDYT AGRDTFISRM IGMAGGKNAA DDVEGWKYNI 240
  241 ESLLEKDPDI LICSKYYDTK EGIKNTDGYK ELSAVKNGKL FEIDNNMLDR QGPRIADGVL 300
  301 ELAKIIHPEV FK

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	312	0.99