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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|196253824, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTTLVMKK RLLAVLLIFT FLIIALLGRV GWLQIVRGEE LQRKAYEQQN SDREIPPRRG  60
   61 SILDRNGKQL AISATVDRIV VNPTEIDKSP EVREQIAKKL AEFLDLDEEA VLKKINKTNS 120
  121 RYEIIKKRVE KSIGDQIRQW KSEEKIKGLY IDEDTKRYYP KGNLAAHVIG FVGEDNQGLD 180
  181 GIEKTMEKYL KGVPGKILSE VDAQGRQMPN YENKRIDPQD GLNVVLTIDE NIQYFAEEAL 240
  241 QKAIEDNKVA NGAFAIVMDP RNGEILALVS KPDFNLNDPR ACPPSEDPAT WTGTSQKDVE 300
  301 TLYRTVWRNK AVSDTYEPGS TFKAITTAIG FEEGVVTPET RTSDRTITVQ GHNIKCWKEN 360
  361 FHGEESFREA VYNSCNPAFV KVALDIGVDK FYNYLRAFGF YDKTGIELPG EAQGNFHAKP 420
  421 TDIDLAVASF GQRFKVTPLE MIAAYGAIAN GGKLIKPHLV KEIVDSEGNV VEKFEPQVVR 480
  481 NVISKETCQT LLDVLEGVVS EGTGRNAYVK GYRVAGKTGT SETDVEGVYV ASFAAIAPAD 540
  541 NPRICVLVAL DNPRGESYYG GTIAAPVAGK IVEETLSYLG VERRYTDKDM EMIAEEVYVP 600
  601 DVRDKTIDEA KKILKEYGLE YRIEGDSTDG NAIIKEQTPK PGAQLAKKSV VIMYTYEPEE 660
  661 QIMVEVPDVT NKTIDEATKA LNAAGLNIKV VGNGNAVKQS VEPGTKIPQG EVVEVEFVFL 720
  721 DTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle