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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89949914, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFECKKNRK KLEVRSVLKT WLIAIWWWLA GMYLQAAVAA PPASLSFNHI LASEVESVGY  60
   61 VVSIAQDNDG FMWFGGANGL ARFDGYELTI YRAGEGQSTL SHSYINRILM ASDGRMWLAT 120
  121 RNGVNLFNPA LDSFTAYRYD DQNSLTLSAN DVNDILEDSE KRMWLATRGG FFSFNPDTGA 180
  181 FTHVPFKQVL ELDAKAQATD ELVWKCVQDK NGIIWLGTHA YGVVQFDPAS NTFKHYAHNS 240
  241 GDDNSISNND VRELFVDSKN NVWVGTYGSG LHVYDRERDQ FNRFEHHSEE KSNIIWDVLE 300
  301 DSAGNIWIGD GSAAHVLDPV TGEFSRFRHS ESDPSSPGNH VVNSLFEDSA GDMWLGFFPS 360
  361 GVDVVDKQAS AFRNYRHNPS NINSVASGGI LTGYEDTKGN LWVGAGYGLS YFDRAAEQFK 420
  421 HYVHDPEDSA SLSANTILSV IEDSQGTLWA GVWAGGLNRL DAGSNSFIRY LPEEGNPQSL 480
  481 LGWEPWSVIE SHDQAIWIAS DKGISRYNRA TDDFTRFEPP LNMLDGDKSL YARVIYEDSL 540
  541 NQIWVGSTRG LFKLTPATGE FIRYKHIEGD TTSLSADFVK SVYEDSRGVL WVGTDGGGVN 600
  601 KFDAATQTFT SYTVKHGLPN NVVTGIIEDD EGYLWFSTQK GLSRFLPVSQ EVRNYSSKDG 660
  661 LVGNLFNRNT PVKTRSGELF FGSSKGFTLF NPRDLKENEY SPPVVLTDLQ IFNVPVKLGQ 720
  721 PDSPLTNTLH YSQAITLDYT QSVFMFEFAA LNFRSPENNQ YAYKLVGFDG GWNHVGSKRT 780
  781 ATYTNLDPGS YQFKVIASNN EGLWNTEGTS INIVILPPYW KTWWAYTLYI ILFIVLLTWF 840
  841 IHQQRQKVSF ERQKVEQERS VVRRLKQLDK LKDEFLANTS HELRTPLNGI VGLAESLMDG 900
  901 VTGPLSHKTK QNLAMIVSSG KRLAGLVDDL LDFAQLKHRG MALNKKAVDI HVLVDVVLSL 960
  961 TLPIIGAKPI ELVNNVSKQL PKVAADESRL LQILHNLVGN AVKFTDEGSV TISAEVQGEE1020
 1021 ICISVADTGI GVPENRFEEI FDSFRQLEGA SNRVYGGTGL GLSVTKQLVE LHGGTIGVRS1080
 1081 TLGKGATFYF YLPLNAAIED EADGQEPETN SAYHAQPSCP EEELNEPVEI RAQAESKSDT1140
 1141 ARTYHILIVD DEPVNRKVLA NYLSLKYYTV HEVRSGMEAI TYVRNGPKVD LILLDIMMPK1200
 1201 MSGYEACKQL RQQYSANELP IILLTARSQV SDLVTGFNSG ANDFITKPIA KEELLARVHT1260
 1261 HLQLRDITLH LDSKVAERTA ELAVKSEKLE ETKLILQEAN DKLEQASLTD SLTGLRNRRF1320
 1321 LNNSIVADIA IANRAYKGWV KGDAPLASDL IFIVLDIDCF KEINDTYGHR SGDRMLEQIS1380
 1381 QQLRSLLRES DYAIRWGGEE FLLVIRFVAR EGAEEVVERI RSTIEAFEFE LDNGEKIKRT1440
 1441 CSMGYACYPF IRAEPTALSW EQVIDGADRA LYIAKSSGRN CWVGISQGPA PSNEPPGVCP1500
 1501 DLGLRVSQGE FELKVSARVK EVSYEG

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