YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50926965, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARRSQRRR GRRGEPGTAL LAPLVLSLGL ALACLGLLLV VVSLGSWATL SAQEPSQEEL  60
   61 TAEDHREPPE LNPQTVESQD VVPFLEQLVR PRRSVSKGRK ARPRRAIAAH YEVHPQPGQD 120
  121 GAQAGVDGTV SGWEETKINS SSPLRYDRQI GEFTVIRAGL YYLYCQVHFD EGKAVYLKLD 180
  181 LLVNGVLALR CLEEFSATAA SSPGPQLRLC QVSGLLPLRP GSSLRIRTLP WAHLKAAPFL 240
  241 TYFGLFQVH

Type	Start	End	Confidence
Signal Peptide	1	48	0.92
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	249	0.99