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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UNK_CANLF
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ HKCTQHRPYT  60
   61 CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC PEGDECPFLH RTTGDTERRY 120
  121 HLRYYKTGIC IHETDSKGNC TKNGLHCAFA HGPHDLRSPV YDIRELQAME ALQNGQTTVE 180
  181 GSIEGQTAGA ASHAMIEKIL SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS 240
  241 KDRRRSPRKH KYRSSPCPNV KHGDEWGDPG KCENGDACQY CHTRTEQQFH PEIYKSTKCN 300
  301 DMQQSGSCPR GPFCAFAHVE QPPLSDDLQP SSTVSSPTQP GPVLYMPSAA GDSVPVSPSS 360
  361 PHAPDLSTLL CRNSNLGSPS NLCGSPPGSI RKPPNLEGIV FPGESGLAPG SYKKAPGFER 420
  421 EDQVGAEYLK NFKCQAKLKP HSLEPRSQEQ PLLQPKQDML GILPVGSPLT SSISSSITSS 480
  481 LAATPPSPAG TSSVPGMNAN ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST 540
  541 VPHPGSITIG GSLLQSSAPV NIPGSLGSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN 600
  601 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTFPAFLS GPGAAELARL RQELEEANGT 660
  661 IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR EQRDALEGQV KKLQEELERL 720
  721 HSGPDPQALP TFSDLEALSL STLYSLQKQL RAHLEQVDKA VFHMQSVKCL KCQEQNRAVL 780
  781 PCQHAVLCEL CAEGSECPVC QPSRAHTLQS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle