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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494192
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLLMSKFLV WIIIFGNFFV VHFFLCFKIP NNKITNVLTY DNSKKQRINS KHNTFLYKND  60
   61 TLNKLLNRKK NKHTLFYRSK KEKDIQESGY LYPFDHLEKK KTKFPPDPYI PSEDEKESSI 120
  121 DIFHDKINDD DLMIYEDDDD AKKYFGKTTF NKPNIIQKDE NSEDDQDDDL NDQNDDPINN 180
  181 PTNNLTDNPT NNSTDNPTNN SIDNPTNNSI DNPTNNSIDN PTNNSIDNPT NNSIDNPTNN 240
  241 SIDNPTNNST DNPINSPNYQ QVTQSNIILE EENNTNKTDI EKDIININFY SSEEKKIACE 300
  301 MIKDQIYYLL HSSMDKTFIE TFNINIESHI VPSEKRICVS YNMKSHTFKR SISNLSDLIE 360
  361 FSNKLKYVLD ERIHKLYYED KNNENAYLNK TLRKELEIGK KERDVTNLSK KNLQMSIESS 420
  421 LKLIEKCMQN MYKQNYEITL HDLKLAYNML PCKYYGFFLS NLCSTISTLS YYVNDLQGTF 480
  481 NFALKSIKYE PKYNVAWKCL GDAYRSFRKF WQAKNFYDIA IYLGYKDEKG ERFEDIVQEL 540
  541 NNLTENALKN VDLLKEHMNN STNIIIKKNI GIVLNKNPDS IGGCYVSYII EGSKASKKNL 600
  601 HHGDQIVALN NHVTYGKPID FCLKAFQKND GTYDIIFFKG NIIELYGLKA YKYLMKNDLF 660
  661 YALFENEQIV SFKRNETILF DMKGFGTFSE YGMSKAEFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle