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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16805191, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVGIIFFCL FFFVVLGACN NVKERIFKNI KKRTKFIILN EPIVDLSFSE NLFHTLLFDL  60
   61 DVDKNLYTLD ESLLNLENLN YSSIFRLLVD TYKNIKENED DNKNIRYIFL GTSFSRIHPL 120
  121 NFEYFLRKLN KYIYNGNIYE KGNVDIRGIL EEYNKEIEEK KLEKQKLNKI KDKNNNNNNN 180
  181 NNSKFSKDGD NEDFNNKNDL YNPSDKLYNN NDDIDVHELL EEIITKEKRF FLNDDDDNDS 240
  241 NDKYILKTDE VNKYKGFFIG YGFNDDIPSV IHHYNFDKNF LFPSLNSGII LDITLLKNIY 300
  301 EVSNILLSNN EKDQSIHIDY IYEVTKYIKE NLRVRLTHSE NVCLNEEQNI HLLDNDPNNF 360
  361 EIYKYYQVLN LFKDYNKNTE EKQYEKIGHE NVRHEETSSE GNENLNRNTK HNNDNNNDNN 420
  421 NYSEDAIAEL LLSYFNVFYP ISTCMCYSIR SKHESLMDYD KYHMINLEND IKLKHYIKET 480
  481 EEIHFNSIEE YKMKLNRINY KYDTLLEEHE NLVTHKNILI GIKTSINTEE ERIPHIKNTY 540
  541 DNKENTQIIF NTFNYDNKLK EKNTFGFYNN SLLQNALEND NIDLDIIYMS DKESQKYDNL 600
  601 YFNSKVTSKE GLCEKLKHMI YYYYEEYVMK NSEKKYFFIA DDDTFVNVKN LIDVTNLTLN 660
  661 TCSHSKKYMY DKYIKSYDFV KENEALFLQN FPKKTLFLYS YLKDTFAKTI QTLKKYDYVP 720
  721 KYCQGGILSK KHKNNDSDDD HDHHVGNKQN NDSTNHQDIE KNQVNVINNN NNNNNNKAKS 780
  781 IPIYLGRRYS YNTFSTNSNE YFYDYLTGGA GILINDETAK RIYECKECTC PSTNSSMDDM 840
  841 IFGKWAKELG ILAINFEGYF QNSPLDYNKK YINTLVPITY HRLNKNRTTK ESRDMYFNYL 900
  901 VNYNRNDKEQ NKDIYVDYLD RNHKNMIDNV FHYFFYVNMY DEKNKVVTKI EHNADMNSKK 960
  961 NKSKNPQKLN NTQGDKNVND DENVNDDENV KGDENVKGDE NVKGDEYMKG DENVKGDENV1020
 1021 KDDENVKDDE NIKGDDNNYN VDNMENIDDI INMVESVDDD VMERNKKGTG KEKKDDKNHN1080
 1081 NKEKATDVKK SSVPTNNIDK NEDTTKYVIK MNEKIYNRMQ ESGKYKQLFD INKFFKKEIE1140
 1141 GHPYFQKIKK KNEKAKKEKE KMNQLKKQKD YTNNYFHTSN MQGNFNQQKM GNYQNQENEE1200
 1201 NDFFDQRPEI EEDAINPMDY EEYMENLSNF EDDGEPYDEY DDYDDFVNTI NADKLKINDQ1260
 1261 NKHLYEQIKD IAQPPVNFQN DQNSNTFDFD TDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle