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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23573638
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAQEVLRQL RFPDLDDFRH YMRGLPANAL MGMGAFAAFT TYWLATRPKA LKPPCDLGMQ  60
   61 SVEMPGDELA RRSVLNDSDE HIAYYYSDAC TMYEVFQRGL RVSDNGPCLG SRKPNQPYEW 120
  121 QTYKEVADRA EHVGSALLHR GHSNTGDKFI GIFSQNRPEW TISELACYTY SMVAVPLYDT 180
  181 LGIEAIGYII EKADISTVIC DVPEKAGMIM DCIKGKGRTV KTIVLIEPFD SELVTRGQDC 240
  241 GIEVLSLREF EALGKANLQK PMPPNPEDLA LICFTSGTTG NPKGAMLTHG NVISNTAAFI 300
  301 RITETILKPS AKDVLISFLP LAHMFERVVE GVILIHGARI GYFQGDIRLL MDDLKTLQPT 360
  361 VFPVVPRLLN RMFDKVFSQA NTPLKRWLLD FAFSRKEAEL KSGVVRKDSM WDKIIFKKVQ 420
  421 ASLGGRVRLI ITGAAPVSPT ILTFLRAALG CQFYEGYGQT ECTAGCSMSM PGDWSAGHVG 480
  481 PPLPCNAIKL VDVAEMNYMA ANGEGEICVK GPNVFQGYLK DPERTAEAID DDGWLHTGDI 540
  541 GKWLPNGCLK ITDRKKHIFK LAQGEYIAPE KIETVYNLSD PVAQIFVHGE SLQACLVGIV 600
  601 VPDPDFLPIW IKKKGIEGSY SELCNNKDVK NAILEDILRL GKEAGLKSFE QVKDIALQPE 660
  661 LFSVQNGLLT PTLKAKRTEI RNRFRENIDE LYAKMNM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle