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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47523462, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEARGARGA LAGPLRALCV LGCLLGRAAA APSPIIKFPG DVAPKTDKEL AVQYLNTFYG  60
   61 CPKESCNLFV LKDTLKKMQK FFGLPQTGEL DQSTIETMRK PRCGNPDVAN YNFFPRKPKW 120
  121 DKTQITYRII GYTPDLDPET VDDAFARAFR VWSDVTPLRF SRIHDGEADI MINFGRWEHG 180
  181 DGYPFDGKDG LLAHAFAPGP GVGGDSHFDD DELWTLGEGQ VVRVKYGNAD GEYCKFPFSF 240
  241 NGKEYNSCTD TGRSDGFLWC STTYNFDKDG KYGFCPHEAL FTMGGNADGQ PCKFPFRFQG 300
  301 TSYNSCTTEG RTDGYRWCGT TEDYDRDKKY GFCPETAMST VGGNSEGAPC VFPFTFLGNK 360
  361 HESCTSAGRS DGKLWCATTA NYDDDRKWGF CPDQGYSLFL VAAHEFGHAM GLEHSEDPGA 420
  421 LMAPIYTYTK NFRLSHDDVK GIQELYGASP DIDTGTGPTP TLGPVTPEIC KQDIVFDGIS 480
  481 QIRGEIFFFK DRFIWRTVTP RDKPMVAPAG ATFWPELPEK IDAVYEAPQE EKAVFFAGNE 540
  541 YWVYSASTLE RGYPKPLTSL GLPPDVQKVD AAFNWSKNKK TYIFAGDKFW RYNEVKKKMD 600
  601 PGFPKLIADA WNAIPDNLDA VVDLQGGGHS YFFKGAYYLK LENQSLKSVK FGSIKSDWLG 660
  661 C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle