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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHX8_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAVAAAGV LMGSEPGPAE ELAKLEYLSL VSKVCTELDN HLGINDKDLA EFVISLAEKN  60
   61 TTFDTFKASL VKNGAEFTDS LISNLLRLIQ TMRPPAKPST SKDPVVKPKT EKEKLRELFP 120
  121 VLCQPDNPSA RTMLDEEDVK VAVDVLKELE ALMPSAAGQE KQRDPEHRDR TKKKKRSRSR 180
  181 DRDRDRDRDR DRDRDRDRDR DKDRERDRDR ERDRERDRER DHKRRHRSRS RSHSRTRERT 240
  241 KGKSRYRSRS RSQSPFKDRK DREKYGERNL DRWRDKHVDR PPPEEPAIGD IYNGKVTSIM 300
  301 QFGCFVQLEG LRKRWEGLVH ISELRREGRV ANVADVVSKG QRVKVKVLSF TGTKTSLSMK 360
  361 DVDQETGEDL NPNRRRNLVG ETNEETSMRN PDRPTHLSLV SAPEVEDDSL ERKRLTRISD 420
  421 PEKWEIKQMI AANVLSKEEF PDFDEETGIL PKVDDEEDED LEIELVEEEP PFLRGHTKQS 480
  481 MDMSPIKIVK NPDGSLSQAA MMQSALAKER RELKQAQREA EMDSIPMGLN KHWVDPLPDA 540
  541 EGRQIAANMR GIGMMPNDIP EWKKHAFGGN KASYGKKTQM SILEQRESLP IYKLKEQLVQ 600
  601 AVHDNQILIV IGETGSGKTT QITQYLAEAG YTSRGKIGCT QPRRVAAMSV AKRVSEEFGC 660
  661 CLGQEVGYTI RFEDCTSPET VIKYMTDGML LRECLIDPDL TQYAIIMLDE AHERTIHTDV 720
  721 LFGLLKKTVQ KRQDMKLIVT SATLDAVKFS QYFYEAPIFT IPGRTYPVEI LYTKEPETDY 780
  781 LDASLITVMQ IHLTEPPGDI LVFLTGQEEI DTACEILYER MKSLGPDVPE LIILPVYSAL 840
  841 PSEMQTRIFD PAPPGSRKVV IATNIAETSL TIDGIYYVVD PGFVKQKVYN SKTGIDQLVV 900
  901 TPISQAQAKQ RAGRAGRTGP GKCYRLYTER AYRDEMLTTN VPEIQRTNLA STVLSLKAMG 960
  961 INDLLSFDFM DAPPMETLIT AMEQLYTLGA LDDEGLLTRL GRRMAEFPLE PMLCKMLIMS1020
 1021 VHLGCSEEML TIVSMLSVQN VFYRPKDKQA LADQKKAKFH QTEGDHLTLL AVYNSWKNNK1080
 1081 FSNPWCYENF IQARSLRRAQ DIRKQMLGIM DRHKLDVVSC GKSTVRVQKA ICSGFFRNAA1140
 1141 KKDPQEGYRT LIDQQVVYIH PSSALFNRQP EWVVYHELVL TTKEYMREVT TIDPRWLVEF1200
 1201 APAFFKVSDP TKLSKQKKQQ RLEPLYNRYE EPNAWRISRA FRRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle