YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24417458
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTRLTLAP LLLIAAVLLA TKATAQPAAP TPEPAGPINL TAILEKGGQF TTFIHLLNIT  60
   61 QVGSQVNIQV NSSSEGMTVF APTDNAFQNL KPGTLNQLSP DDQVKLILYH VSPKYYSMDD 120
  121 LLSVSNPVRT QASGRDNGVY GLNFTGQTNQ INVSTGYVET RISNSLRQQR PLAVYVVDMV 180
  181 LLPGEMFGEH KLSPIAPAPK SKSGGVTDDS GSTKKAASPS DKSGSGEKKV GLGFGLGLIV 240
  241 LCLKFLF

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	247	0.99