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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25283742, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR  60
   61 FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD ERGFAEETRA EDLRPEENIL 120
  121 GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS 180
  181 GYLPEDVAIF GVSRKNLTDE DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN 240
  241 RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG 300
  301 FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ 360
  361 VVFPSDLMLF SNFLLLFLRF SDGYGIIRDI VHSHILQTIA LLAMEPPISL DGEDIRNEKV 420
  421 KVLRSIRKID PRDVILGQYK SSSRDKNGVI LNGVDPTYCA AALYIDNARW DGVPFLVRVG 480
  481 TGLIKHRVEI HVQFRHVPGN LYRENIGINI DLGTNELILR DEPDEAILVK INNKVPGLGL 540
  541 QLDASELNLL YKDRYKTEVP DSYEHLIHDV IDGDNHLFMR SDEVAAAWNI LSPVLEEIDK 600
  601 HHTAPELYEF GGRGPVAAYY LWAKHGVPWA DD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle