YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22901764
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLALVLLW AATATALLDI CKEEIKTGNC RGAFRKFGYD RCTNKCIPYT YGGCGGSSNM  60
   61 FDTLEECQEK CGKPEDRCSK PLERGICLAS MKRYGYDTSS KKCKAFIYGG CGGNENNFET 120
  121 MAECRETCKD TSSEEESVPD ACLLPSEVGP CKGKERRFYF DQKRGNCKSF FFGGCGGNGN 180
  181 NFMTKAKCME TCSKHIKPET EQDVCSQPIK AGPCMAMLKR YAYDNKKKRC VQFIYGGCKG 240
  241 NKNNFESMEE CTRTCKKAVP EPEQDTCSQP IEVGPCKAML KRYAYDNKKN KCVRFIYGGC 300
  301 KGNKNNFESM EECTRTCKKA VPEPEQDTCS QPIEVGPCKA MLKRYAYDNK KNKCVRFIYG 360
  361 GCKGNKNNFE SMEECTRTCK KAVPEPEPEK ETCSQPIEVG PCKAMLKRYA YDNKKNKCVR 420
  421 FIYGGCKGNK NNFESMEECT RTCKKAVPEP EQDTCSQPIE VGPCKAMLKR YAYDNKKNKC 480
  481 VRFIYGGCKG NKNNFESMEE CTRTCKKAVP EPEPEKETCS QPIEAGPCKA MVRRFAYDNA 540
  541 KEKCVEFFYG GCKGNKNNFE TMEDCTFTCE QRLAKPELEK DVCSQPITAG PCRASIPRYG 600
  601 YDSKKRKCVK FTYGGCKGNG NRFPTKNECE KTCKRGATGT TNPGGENDKC LLPIVTGPCK 660
  661 GKNRRYAYNN KTGKCVRFTY GGCGGNENNF KTKKDCQDAC ENINAASPCT LPIDKGEGDL 720
  721 NLTRYGFKNG KCVAFKYGGR RGNLNNFGSK ADCKEACLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle