YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19074964
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSVVSVDQ FVNFALSIAS MKISGRPMFQ TPKAIWILRG VYLCSNLIQL MFSFYIMRKI  60
   61 KKTNDCRKVK IKKEASLFRD GSEEEEEEMT YASYDESELT KISRTAVIQF LIISVLHFKW 120
  121 KVIQPLFVQS FVPLRNLFLS PLYTAYVWNR PVLRPFEANM LFQKIPAAPE KKRIKED

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.61
Transmembrane Helix	35	57	0.73
Cytoplasmic	58	177	0.54