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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE37367
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLRKIQEF WKFTKRLLTE KGKGDAGSET ETPKYANDFI VKKSFAYHLF WAECDSSLRL  60
   61 SLFNVGFSND GYAVFTTAVL NMTPYHFQMY VNGRNCGLLT LQCKFQLQPN ESLNIVLDKI 120
  121 DMQSNLMTFT YRGGKKDPDV YINGCYESMS SCAYGSQQST DTRGTLYQDS ICACVGSFPT 180
  181 CLFSENDTCI SNRPFWNYDP PTASTTEEID TSSSTSRSTS TPSSTEASST VTSTTTARTT 240
  241 TTMIPTTPTT TTIASTSTVT SIVTSTTVTS TTVPTTTVVT TVPTTTATST STSTASTTTT 300
  301 TPSTSTHTTT VTYSTNATSS TTSPTTSPTP EPEPTTTATV LAPTLKNLSD SGVGINNVST 360
  361 VLNETLTYSE MGANLNATQV AEISTILINS ANVPGLTAEN SMAILHNLDN MLYVSPTIMY 420
  421 QSGNSAQGVL NSLGTMVDNT VDQRIEYLNG QNLGFSSKRL DCSNLGADDG LLDLGSKFEL 480
  481 INSTDSLGKW HSILVPLSDL CSTQDLSHVF FTIYRDTSLF VGPQQYRTYT GTNKPISSGE 540
  541 AETYTPPPRV PRSAGFYEAE PYQMNATSQT VPLSPCARQT SLPPTPVMSA TVMNNGVAVS 600
  601 VSATSEATMA LLRFNISTLM KPLHGNLKVT WWDIGRNAWA EDRQCEIVSE SDGILEARCT 660
  661 HLTDFAIIVD AALNDPNVCD NALITLGYVV NGLSIVSLAF LTFFSISAYI NSLANSRLYS 720
  721 YVRGHNLARR DFLALIYHFD LLLFYVFFTV FSNQDVSGDM CTAMAAVMYA LLLCSLFLTI 780
  781 FQALRNILVF LPTPAYRLLN ICFGTVPVLI TSVALPFILS IFLLVFTKFF DRQDCFCWVR 840
  841 PDYIVAAIII PVTVLLLSTV VCTSFMIYKV FCGMKRKFSQ GGHHYDPNVI TKIVSIVVMQ 900
  901 ISLGLPWILQ FGTLYSPYTT FWHYTFTIVL GSQGTILLLI FLYKRYRAWQ ADSTLKSRGQ 960
  961 SYSKNSTKRT KLVEEENSLG SSTDTFNEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle