YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|147905137, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCALIGRK VVQGAGACLF LRRGRGHLAV SAGLRQSAAD KWRESGCRQR NSRKMPEINT  60
   61 DSLDKQQVML LAEMCILINE DDQKIGEDTK KNCHLNSNID KGMLHRAFSV FLFNSENKLL 120
  121 LQQRSDAKIT FPGCYTNTCC SHPLNTPQET EEENSIGVRR AAQRRLKAEL GIPMEQVMPD 180
  181 ELKYLTRIHY KAQSDGIWGE HEIDYILFVQ KDVALDPDPN EIQTHCYVSK EDLKQLLEKA 240
  241 KGGEVKITPW FQLIADTFLF KWWDNLQNLE KFEDHDKIHR M

Type	Start	End	Confidence
Signal Peptide	1	26	0.56
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	281	0.99