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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27375592, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGAARKGTH RQKGHNFRAL PYQGRSGALT FLDFWAGAAF NPATFSERLS FRPADWPWRP  60
   61 EVNARQRYAP SGAKVFGRSL PGFRPRTENW SSPAKAGHDR GECGNPAQAG QGTTALFDNL 120
  121 SERLGGILDR LTGRGALTEK DVDAAMREVR RALLEADVAL EVVRSFTERV REQAIGATVV 180
  181 KSVTPGQMVV KIVHDELINT LGAEGQTIDI NSVPPVPIMM VGLQGSGKTT TTAKLARRMV 240
  241 QRDRRKVLMA SLDVYRPAAM EQLAVLGRDL DIPTLPIVAG QQPAQIAKRA LEAGKLGGYD 300
  301 VVLLDTAGRT TLDEDMMAEA AAIKAAANPH EVLLVADSLT GQDAVNLARA FDERVGLTGI 360
  361 VLTRVDGDGR GGAALSMRAV TGKPIKLIGT GEKTDALEDF HPDRIAGRIL GMGDVVSLVE 420
  421 RAAANIDAEK AARTAERMRK GQFDLNDMRE QLSQMANMGG ISGLMGMMPG ISKMKNQIAA 480
  481 AGIDDKILKR QVAIIDSMTR DERRHPDLLK ASRKKRIAAG SGQSVEHVNK LLKMHRNMAD 540
  541 VMKAMGSGKR GPLAGIAQAM GFGGGMKMPS PEEMKAMQEK MQSGGGQGLP NLPKDLPPGL 600
  601 RTGLPNLPGL TGLSGKPTLP GLGGFPGKKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle