YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58393907, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAVPGGVYS QNQQPSCFDR MKMGFTIGFC VGMASGALFG GFSALRYGLR GRELINNVGK  60
   61 VMVQGGGTFG TFMAIGTGIR C

Type	Start	End	Confidence
Cytoplasmic	1	22	0.57
Transmembrane Helix	23	45	0.90
Non-Cytoplasmic	46	57	0.51
Transmembrane Helix	58	79	0.70
Cytoplasmic	80	81	0.53