YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55237601, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIRRRVKNTN VRSAECGRKI VVRAFQRAFS EALSMYFFFV LASLMVANPA LAYLSAGMKD  60
   61 QFLSDMLLRE LVDRMGKDLA EAADSYIDPS AMDELPASRL ALMARVTKDL ESEQLDYDAL 120
  121 LDGSNPNPSP RDQEYLQHSS LWGHQYVSGG AGEGPNRPKP QVKTDASLPA YCNPPNPCPV 180
  181 GYTEDQGCTM DFENTAAFSR EYQAAQDCMC DAEHMFNCPA AAQSESNPQM DSDLENFIAR 240
  241 QFHTQEHKNL VAKKFHVKKS YNPFLQGEKL PVAAKKGFNV NV

Type	Start	End	Confidence
Cytoplasmic	1	32	0.87
Transmembrane Helix	33	54	0.90
Non-Cytoplasmic	55	282	0.91