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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58381346, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI NYEEMKAMLY TANEEAPALD SVEEDVRKRH FANFDENFYH  60
   61 YCDQELKKIN TFYSEKLAEA TRKYAALNTQ LRTTLEGQQK SKSKGHSHKP INLPYRKAQE 120
  121 LKLAFSEFYL SLILLQNYQN LNHTGFRKIL KKHDKILASD NGARYQKEHV EMSHFFINKD 180
  181 IDKLINDTET TVTTQLEGGD RQRAMKRLRV PPLGEQQSPW TTFKVGLFSG SFVVLFVAVI 240
  241 LSAVFHDSAT GENLKIAFRL YRGPLLLIEF IFLIGVNIYG WRSSGVNHVL IFELDPRNHL 300
  301 SEQHLMEMAA IFGVVWTLSL LSFLYSTSLS IPPYINPLLM TVIMIAFLIN PLRVFRYEAR 360
  361 FWLLKTIGRM IAAPFFHVGF ADFWLADQLN SLVTALLDFQ FLTCFYVTNG NWLEAGNTRQ 420
  421 CMEESYILRP IVNCLPAWFR FAQCLRRYRD SREAFPHLVN AGKYATTFCV VIFATLRSAN 480
  481 ASKYEDSSEN VFLWLWLISS VVSSCYAYTW DIKMDWGLFD KNAGENRFLR EEIVYSMPFF 540
  541 YYFAIIEDLL LRFVWILSYA LTENKLISGD LMTSILAPLE VFRRFVWNFF RLENEHLNNC 600
  601 GKFRAVRDIS IAPIDSNDQV IILKMMDEED GVINRYTKHN RPKPKKMKDD RRALLPAFKT 660
  661 THEVIPPDAT NV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle