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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55245300, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEAHVALTFP PARKYDLDFL DNSRTKPPCG MPKGSLKTSF IEGSTFNVSW HLAYPHRGGF  60
   61 RLEILDTKEK PILSLTPSSK ERRFVREDAT AQQFQVSLPR NFTCRDCTLR LVRQADEWGG 120
  121 NYRFWSCADV DIVPRREHHE TCSGHGKFIA RCKCDKKYYG PRCEFWDECV TNQDCGIQGT 180
  181 CVDLGGTSLP RRQCYCRLGW FGPGCNKKSP IKSTDIDYSV YKAKTLSPDL NVYWRVLKEQ 240
  241 KELEVVLKVN GTSWVALGVR PRKLTAECKN FPLIAAPGAA GSEAGVAEPE PASEPTSEPE 300
  301 PGAEPGKFPT RLCVITRTST MSCPKRLRVG GQGYSVTLSK HTTLTRASLL IVVCCLLIHL 360
  361 LLKCSAKSDC TSNVSKQRDL MIRKEGQNER GYDKTLYSLL FSSVVEPKSE PEPASEPGAE 420
  421 PNAEPEPKSE SEPGAEPTSE PASEPASEPS SEPGKKIEHE TSEQRSPIQC ATEPTPEPKG 480
  481 PAKKSKRAAA TTPAAEPEPA SEPAAKPKPK PTAAAAGPKL KLNPYTPRHD FNPMDCTDIV 540
  541 IGTARGDNHR VWDYYTRDRS TPRMDSFWGG KSDLTATGGF ERDGVTTIVY RRPLAASEPT 600
  601 DHEIVDDLMH VIWARGQEPG AYVHSPPSGV EKETASVREF YQPDELKYHG HRMQRGVTQI 660
  661 NFLEEEVQHK GVIVPAGPVG HELDNECHGF YKYPRTCDPE QANCEYFLSW QTVARGEAVH 720
  721 FHLETKHTAT WTGVGFSDDQ RMSQTDAIIG WVDKSGRPFL MDTWINGYSA PKLDDRQDLY 780
  781 NASGAIQNGR TVLDFTRKRV TGDESDLAFA EDRCLYMMFP IEGGAFNPVN KKLGKHASVP 840
  841 VVTDTRVCIK SCAKQFEQLL TVAATPAPDR IAYGASIKLT NLAAGFQVPD SGTPEHRDLS 900
  901 KSVTDTFNGV LREVPGFYRT DVQEFEKDAD GSVVVKMNIL VDKEMKNGTK NLLADDPAKL 960
  961 ELTLHNLMVN NLSSGKVGAF SVDPTYLEFT QLEGQASSPK EEYELLPAGV RLYLILGCIA1020
 1021 GLVFIAIVQA TCTIIKTRRT NRLKDQLIPN SAWKDYSSNT NYAFDNFEPE SKHHKGRSSD1080
 1081 RGYSNGNSQQ TTLQMSHSPN KSQYYEIDRT DGGGMPTHRN GSSGYPYPPG QPRHGYDRTG1140
 1141 DRSSYADRAY SLPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle