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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C1S_PIG
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWCIVLLSLL AWVDAEPTMY GEILSPNYPQ AYPNEVEKSW DIEVPEGYGI HLYFTHLDIE  60
   61 LSENCAYDSV QIKSGGREEG KLCGQKTSKN PKSAVVEEFQ VPYNKLQVIF TSDFSNEERF 120
  121 TGFAAYYVAV DVNECTDFAD SPCSHFCNNY IGGYFCSCPP EYFLHEDKKN CGVNCSGDVF 180
  181 TTLIGEVASP NYPNPYPENS RCDYQILLEE GFQVVVTMRR EDFDVEPADS GGHCPDSLIF 240
  241 VAGNQQFGPY CGNGFPGPLT IETKSNALNI IFQTDETEQK KGWKFRYHGD PIPCPKEVTA 300
  301 NSFWEPEKAK YVFKDVVKIT CLDGFEVVQG TVGSTSFYST CQSNGKWSNS KLRCQPVDCG 360
  361 SPEPIPHGKV EDPEHTLFGS VTRYSCEQPY YYMETDGSEE YRCAGNGSWV NELLGAELPK 420
  421 CVPVCGIPSE PFKGMQRIFG GIITKIESFP WQVFFQNPRA GGALIDEQWV LTAAHVVEGN 480
  481 REPVMYVGSS SVVTSHLANG QMLTAERVFI HPGWEEQDAS ERKNFDNDIA LVRLKDPVKM 540
  541 GPTVSPICLP GTSSDYDPSV GDLGLISGWG RTNTKDHVVK LRGAKLPVAP SDKCQEIKGT 600
  601 NPRIGTSSFV FTDNMICAGG RGVDSCNGDS GGAFAMQVPN EETPKFYVAG LVSWGPQCGT 660
  661 YGIYTRVKNY IDWIRETMQQ NSAPSVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle