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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52538087, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSVVGVKI SKTGNYTILF TVSIASMRIR MFSQIANIIV YCLVILFGVI VAITMSVKLT  60
   61 WQTFVNGMVY YWCQTLAPMR DIFKSQPVYT IRYYGHELKY NAQQILQDKY IQWCADQVWT 120
  121 AFILAAIIAA VVCVITFFVT TWILGHQGKQ QSEDEITGGR QLTDDPKAVA KMLRRDGLAS 180
  181 DIKIGELPLI KDSEIQNFCL HGTVGAGKSE VIRRLMNYAR QRGDMVIVYD RSCEFVKSYY 240
  241 DPATDKILNP LDARCAAWDL WRECLTQPDF DNVSNTLIPM GTKEDPFWQG SGRTIFAEAA 300
  301 YLMRNDKDRS YSKLVDTLLS IKIEKLRSYL KNSPAANLVE EKIEKTAISI RAVLTNYVKA 360
  361 IRYLQGIENN GESFTIRDWM RGVREDGKNG WLFISSNADT HASLKPVISM WLSIAIRGLL 420
  421 AMGENRNRRV WIFADELPTL HKLPDLVEIL PEARKFGGCY VIGISPTPQL EDIYGQKPAE 480
  481 TLFDVLNTRA FFRSPSRNIA EFAAGEIGEK EILKASEQYS YGVDPVRDGT SVGKDMERVT 540
  541 LVSYSDVQTL PDLSCYVTLP GPYPAVKMAL KYQQRPKVAP EFIPRTIDGK AEERLNAALA 600
  601 AREHESRSIA MLFEPDADVI APEGGAENAG QPQQPAPAPR AADTASASAS VAGAAGTGGV 660
  661 EPELKTKAEE AEQLPPGISE SGEVVDMAAW EAWQAEQDEL SPQERQRREE VNINVHRAPE 720
  721 KDLEPGGYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle