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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50882671
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNAKDMTQ GGQIASMRIR MFSQIANIML YCLFIFFWIL VGLVLWVKIS WQTFVNGCIY  60
   61 WWCTTLEGMR DLIKSQPVYE IQYYGKTFRM NAAQVLHDKY MIWCGEQLWS AFVLASVVAL 120
  121 VICLITFFVV SWILGRQGKQ QSENEVTGGR QLTDNPKDVA RMLKKDGKDS DIRIGDLPII 180
  181 RDSEIQNFCL HGTVSTGKSE VIRRLANYAR KRGDMVVIYD RSCEFVKSYY DPSIDKILNP 240
  241 LDARCAAWDL WKECLTQPDF DNVANTLIPM GTKEDPFWQG SGRTIFAEAA YLMRNDPNRS 300
  301 YSKLVDTLLS IKIEKLRTFL RNSPAANLVE EKIEKTAISI RAVLTNYVKA IRYLQGIEHN 360
  361 GEPFTIRDWM RGVREDQKNG WLFISSNADT HASLKPVVSM WLSIAIRGLL AMGENRNRRV 420
  421 WFFCDELPTL HKLPDLVEIL PEARKFGGCY VFGIQSYAQL EDIYGEKAAA TLFDVLNTRA 480
  481 FFRSPSHQIA EFAAGEIGEK EHLKASLQYS YGADPVRDGI STGKEMERQT LVSYSDIQSL 540
  541 PDLTCYVTLP GPYPAVKLSL KYQARPKVAP EFIPRDINPE MENRLSAVLA AREAEGRQMA 600
  601 SLFEPDVPEV VSGEDVTQAE QPQQPQQPQQ PQQPQQPQQP QQPVSPAIND KKSDSGVNIP 660
  661 AGGIEQELKM KPEEEMEQQL PPGISESGEV VDMAAYEAWQ QENHPDIQQQ MQRREEVNIN 720
  721 VHRERGEDVE PGDDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle