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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50416552, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLRRVCGR AASLTRVWAG PAGPELFPRS FTCSPHRLAY AKELFLGSIR KDEVFPYPEI  60
   61 SKEELEEINQ FVAPVEKFFN EEVDSKLIDQ TAKIPPETLD GLKNLGLFGM QIPEEYGGLG 120
  121 LSNTMYARLG EIISLDGAIA VTLAAHQAIG LKGILIAGND EQKAKYLPKL ASGEHIAAFC 180
  181 LTEPGSGSDA ASIQSRATLT PDGKHFLLNG SKIWISNGGL ADIFTVFART EVVDKDGVTK 240
  241 DKISAFIVER AFGGVTHGKP EDKLGIRGSN TCELHFENTK VPVENVIGEV GGGFKVAMNI 300
  301 LNSGRFSMGS ASAGIIKKLI EMTAEYACTR KQFNKKLSDF QLIQEKFALM AQKAFVMESM 360
  361 AYLTAGMMDR PGLPDCSVEA AMVKVFSSEG AWLCVSEALQ ILGGLGYMKD YPYERYLRDS 420
  421 RILLIFEGTN EILRMYIALT GMQHAGKILT GKIKEMKKGN VGVAMELFFK KLRDSMGRNV 480
  481 NLGLTGNEGV VHPSLEESAK KLEENVYYFG TTVESLLYRF GKTIVEEQLA LKRVADVIIN 540
  541 LYAMTAVISR ASRSISVGLP NHDHDVLLAN MFCSEVYFKN NYTLAQLGKH SPENQDDSIR 600
  601 KIAGHILEKR GYTCSHPLDR TF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle