YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCMC2_XENTR
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPRSLVSP LLSGVFCQCD TVGGAPHTHD TPASPSLAAA LAADPCGGLV CGGPEHETRL  60
   61 QILFQELDVN KDGGICINDL AVGLKRLGVH RTELELRKIV KAGDKDQDGQ LDFEEFVHYL 120
  121 RDHEKKLRLV FKSLDKKNDG RIDAQEIMQS LRDLGVNISE QQAEKILKSM DKNGTMTIDW 180
  181 NEWRDYHLLH PAENIPEIIL YWKHSTIFDV GENLLVPDEF TVEEKQTGMW WRHLVAGGGA 240
  241 GAVSRTCTAP LDRLKVLMQV HASRSNNMSM LGGFTQMIRE GGIRSLWRGN GINVIKIAPE 300
  301 SAIKFMAYEQ MKRIIGSDQE TLGIHERLVA GSLAGVIAQS SIYPMEVLKT RMALRKTGQY 360
  361 QGMLDCGKKI LLKEGVSAFY KGYVPNMLGI IPYAGIDLAV YETLKNAWLQ RYATSSADPG 420
  421 VFVLLACGTI SSTCGQLASY PLALVRTRMQ AEASVEGAPQ MTMSKLFKHI VKTEGAFGLY 480
  481 RGLAPNFMKV IPAVSISYVV YENLKLTLGV QSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle