YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16766264, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNYSLRARM MILILAPTVL IGLLLSIFFV VHRYNDLQRQ LEDAGASIIE PLAVSSEYGM  60
   61 NLQNRESIGQ LISVLHRRHS DIVRAISVYD DHNRLFVTSN FHLDPSQMQL PAGAPFPRRL 120
  121 SVDRHGDIMI LRTPIISESY SPDESAIADA KNTKNMLGYV ALELDLKSVR LQQYKEIFIS 180
  181 SVMMLFCIGI ALIFGWRLMR DVTGPIRNMV NTVDRIRRGQ LDSRVEGFML GELDMLKNGI 240
  241 NSMAMSLAAY HEEMQHNIDQ ATSDLRETLE QMEIQNVELD LAKKRAQEAA RIKSEFLANM 300
  301 SHELRTPLNG VIGFTRLTLK TELNPTQRDH LNTIERSANN LLAIINDVLD FSKLEAGKLI 360
  361 LESIPFPLRN TLDEVVTLLA HSSHDKGLEL TLNIKNDVPD NVIGDPLRLQ QVITNLVGNA 420
  421 IKFTESGNID ILVEKRALSN TKVQIEVQIR DTGIGIPERD QSRLFQAFRQ ADASISRRHG 480
  481 GTGLGLVITQ KLVNEMGGDI SFHSQPNRGS TFWFHINLDL NPNVIIDGPS TACLAGKRLA 540
  541 YVEPNATAAQ CTLDLLSDTP VEVVYSPTFS ALPLAHYDIM ILSVPVTFRE PLTMQHERLA 600
  601 KAASMTDFLL LALPCHAQIN AEKLKQGGAA ACLLKPLTST RLLPALTEYC QLNHHPEPLL 660
  661 MDTSKITMTV MAVDDNPANL KLIGALLEDK VQHVELCDSG HQAVDRAKQM QFDLILMDIQ 720
  721 MPDMDGIRAC ELIHQLPHQQ QTPVIAVTAH AMAGQKEKLL SAGMNDYLAK PIEEEKLHNL 780
  781 LLRYKPGANV AARLMAPEPA EFIFNPNATL DWQLALRQAA GKPDLARDML QMLIDFLPEV 840
  841 RNKIEEQLVG ENPNGLVDLV HKLHGSCGYS GVPRMKNLCQ LIEQQLRSGV HEEELEPEFL 900
  901 ELLDEMDNVA REAKKILG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle