YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16801543
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQLILNII LACLWMFLES SFSFATFIIG FIIGIFLLLF MRRFLGSRFY LFRLFALVKL  60
   61 VFRFLHDLIV STVHVSRIVL KKDMNIRPGI FRYDTTLETD WEVTMLALLI TLTPGTLSID 120
  121 ISDDYKAIYV HSLHVPNIEE EIATIRKSYE GAIMEVFHG

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.64
Transmembrane Helix	21	41	0.92
Cytoplasmic	42	159	0.48