YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25522563
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAILHSASC SPVWWCCSTS SPSSRSARID GLSIGGGEDM ANMEAETARA GSQRVSNRSI  60
   61 LVLCLVFFCA MIGMAYAAVP LYSLFCRVTG YNGTTQRVEQ YSDVILDKTI NVTFDANTSN 120
  121 GLNWDFRPVD KMVKPKIGET IKVTFKATNR SPVATTGTAV FNVTPMEAGA YFNKVECFCF 180
  181 TETTLQPGET LEMPVVFFVD PDIATARETK SVHTLTLSYT FYPAKTEKPV ASLPVKTESG 240
  241 DSKL

Type	Start	End	Confidence
Cytoplasmic	1	58	0.87
Transmembrane Helix	59	79	0.87
Non-Cytoplasmic	80	244	0.96