YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159141008, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQAGLAAAT HDVSLWALFM QAGFIVKFVM IGLIAASVWT WAIVFDKYVS FGKAKRQFDQ  60
   61 FEQVFWSGQS LEELYRTLAE RQNVGLAAIF VSAMREWKKS FERGARSPIG LQMRIDRAMD 120
  121 VTIAREGEQY EARLGSLATI GSAGPFIGLF GTVVGIMTSF QAIAGSKSTN LAVVAPGIAE 180
  181 ALLATAIGLV AAIPAVIAYN KFTADAHKLS ARMEGFADEF SAILSRQIDE KLQTRQAAQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.79
Transmembrane Helix	23	45	0.89
Cytoplasmic	46	136	0.90
Transmembrane Helix	137	163	0.79
Non-Cytoplasmic	164	177	0.81
Transmembrane Helix	178	202	0.83
Cytoplasmic	203	239	0.94