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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20090892, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFMVLQVPI HTRRLLSIFM IIVLLTPNVY CLENTEASQD VNSEGSQVDS ESYEENNKNI  60
   61 VESEEETSET ISDLDSESVD DDTETVSEDT MLTATTVSED EEPLRDAKAY LSPTLENENN 120
  121 YFDTSLFTGS FVYSYPIETL KGRTGLEPEV SLTYSSATGS KGTYGSLGIG WSLNENCIIR 180
  181 DTRYTPENTN DDRFILVLDG STYKLVYVES DNSYHTETES FMKIEKSATS SNSFGDYWTL 240
  241 NMPDGTKYRF GYNIDSEQRN SVESRNYVSK WWLDLIEDVN GNKIKYTYLE NPVSGEVGST 300
  301 YPDSITYNDN HAVIDFEFTE KPRVFTIYEY GNKIIEKNLI SSITVRNDET VLWKYDLDYE 360
  361 TQQLKLHLKS ITKTGLNNEE FPPTVFEYDS ITEGWQESSS WTPPTSMSGD KGRRIADVNG 420
  421 DGLDDILKGY VDSDGDVYCS TWINTGDDWE LNSSWTTPTY FRHYNHDGGA RLADVNGDGL 480
  481 VDIIQHGFYI SSAWLNTGTG WEQNNSWIPP LDFGWSSDYG VRVLDVNGDG LVDIIKGYKN 540
  541 DRGTIYYDAY LNTGEGWIQD NSWNPPTYFS YDNIDTGVRL TDLNGDDLVD IFKLRSSWLN 600
  601 TGSGWEQDNS WAPPISLDSD QGVVLVDVNG DGLTDILKSY YNDAGYTYDA WISTGNGWEN 660
  661 DNSWNPPTLI ASYGKDQGVR FADLNGDGLT DIIKAGYSDY CAWTNTNTES TENYKTQGLL 720
  721 KKIQHSTGGS TTIKYEPSTL FDNTGEDGVS DLTMSMWVTS SVTGDNGITG TGSVVSTTDY 780
  781 TYKNGMQYFD PPEEIEFRGF GEVTVENEYS IVKHFFHQDN VLKGIEHHTE VWDKNGNLYS 840
  841 SSDTEYTAQE IYPDVNLILL DSESKTRFDG LVQNPTSSAG WSYLTEYNEY DDYGNPLSIT 900
  901 DHGDVNNAGD EKYYHFGYAN AENPWILGKK THEWVEDSDH VKKSESWYYY DETNDNSAIS 960
  961 KGQLTKTVLW NNMGDNPNVL YDYDNYGNII RITNPEGASK NIGYDENHLY PVYIENAFGQ1020
 1021 KECYEFNDLG RITKITDSND ISIAYIYDDL HRITKVLKVN DTLDSPSIEY TYYQDGVAPE1080
 1081 KILTTTKECG SEENNYVING SVFSNYKRIT ISPSSDGTLT DYQVKLDINY ESEMQSDFDD1140
 1141 LRFVDENGIL LPYWIEEKVD SSYAKVWVKV PVIDGIDGAT IKMYYDNSYV SSAENGDDVF1200
 1201 EFFDDFESGV IDNAKWNEVG SPTIVDDNGD KVLKVTPSNE VNTFNKFSGT EYIVGGLMKF1260
 1261 SSFGDYGPRM TLDVRRQNDQ TILATCRIES YADGTGGTGT SIRYYPGSGS FITVAQARPS1320
 1321 WSTGVWNRFS FSSTNSTQKL TINGLVISGT CENNLSGSIN IHTWDSGNDI RLSYLYVRKF1380
 1381 ASSEPTVVLE EKNYVSTFDS TDSYDGFGQL IQKKYEGEGG WIIQNTAYNE LGLVESAEIP1440
 1441 HYSDQTGLSV TYEYDAAGRP TVITNTDSTT LTYDYNLDDT TITNQNGVDK TLTSDVFGNI1500
 1501 VKVYEFNEGE TYVTSYSYDA LNNLIEITPG FNDPQAPPSV YFTYDSLGRK VAMDDSDMGS1560
 1561 WTYEYDLNGN LINQTDSRGV STILSYDDLD RVTAIDYPND EDISFTYDLE FNGTLSRVTK1620
 1621 GPASSSYDYD LRYRVESETL TIDGTPYTTS YDYDSMDRVT GITYPNGEAV SLTYNAQTLL1680
 1681 ESVDGVIDDL DYNARNQITR KEYSNGVITT YTYDSQKLLL DRIYSAGLQD LNYDFDNVGN1740
 1741 VLEIADNTQN SVKTYGYDDL DRLVSADMSV NSVPTYQRDF TYDRYGSIRQ VDNNGATVSS1800
 1801 YGYSATPSHA PVTYNGNTLD YDANGNLVDD EDFIYVYNDA NQLSEVRYSA NNSLVEKYWY1860
 1861 DANGQRIKKQ NSDGEFTYYI NKFYEIDNGI STSYFFRDDE RVAKETSESM EWYLSDHIGS1920
 1921 TSLMVNENGL EVERTDFPYG QVRSGGLEKY GFTGQENDAD TGLMYYGARY YSPEYRVFVQ1980
 1981 PDTMLPDPYN PQALNRYSYV LNNPVKYTDP SGHVVDVLVD GGFLLMDLDD IRTGNADKWT2040
 2041 YIGLGVDLVC AFVPGVTGGR LGVQALEETV THADNVEDLF KLLDKTVDAE KKVDDVIDSG2100
 2101 KVAKNSNQIY NVIKRADLPN TKITSSKLQH EWKHATDFGI KGNWNKANGD LYEKAIQNHI2160
 2161 NTAPEVYKST YRQNQDVYVY LNKETGVGVY TDLSGNYIGA GNSVRNRLSI IQLMDLK

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