YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20515188, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSRILLLL TIFVTSAALI LSGCKTNTPN TASTSTKEGK TIGLVISTLN NPFFVTLKNG  60
   61 AEEKAKELGY KIIVEDSQND SSKELSNVED LIQQKVDVLL INPVDSDAVV TAIKEANSKN 120
  121 IPVITIDRSA NGGDVVCHIA SDNVKGGEMA AEFIAKALKG KGNVVELEGI PGASAARDRG 180
  181 KGFDEAIAKY PDIKIVAKQA ADFDRSKGLS VMENILQAQP KIDAVFAQND EMALGAIKAI 240
  241 EAANRQGIIV VGFDGTEDAL KAIKEGKMAA TIAQQPALMG SLGVEMADKY LKGEKIPNFI 300
  301 PAELKLITKE NVQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	313	0.99