YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21228822, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIKKICLI VCFLSILAFV LSFTSGFLPA AGAAEAQKNL EGEEVPAAST RDEVLSQRPS  60
   61 SVEGLLTKGN DLYSLKEYEL SIGCFEKALE IEPNSSMAWY GKGCSLSALE KYEESIACYD 120
  121 MAIETFPVSS ESWYKKGDEY LQTKNYIEAI NCYEKSLATD NYLSRVWFQK ATASEKLGLD 180
  181 QEALTSYDTS IQFGTNSSKA LQMQGKAYAQ LENYEEAMNC FNRALNVTPE DFELWNQKGI 240
  241 MYDLSGDYES AIECYDQAIS LNPDLVEAWY NKGMDLERME MYQDALTCYE FVLLSEPENL 300
  301 SALQKKGLCL ERLGRNEEAL QCYDEILVYS PDNTEAWYSK GSVLNAMGQY DAAIICYDRA 360
  361 LNPDAGIEIQ EAGDSLLESL KVYDSSLPVY SEVPEFKSPA VKIWYDKGMA FDNLGNYESA 420
  421 LECYNKVLET EPDHAIIWYQ KGLNLDRLNK SAEAVGCYDK ALKLDSGYAK VWYKKGYDSS 480
  481 KLGKYKDAVK SYDEAIDLDE NYTLAWYGKA FALAKIGRYE DSIVCYDRVL EVAPDSAEIW 540
  541 YNKGLLLDEL GRYQEASDCY SQALQINSNY SVARFRLNKD IEMLSGNLTS ISANNKNTNI 600
  601 NPQKAITGGF WSYLLSYKYA SPDDNTEISG SIKDLSPEFG YDEAWYGKAS TYSKLEMYED 660
  661 ALHSYDMALA INPVRTEAWY EKGSALDKLG RSEEALECYQ KALDIDPQSS NAWYGMASTS 720
  721 SDLGRAEEAI AYYDQLLKLN STDSEALQGK SLALASLGRY DEAVACFNPL LELEPENVEA 780
  781 LEGRAFALAR SGRPEAALED YDVIMKLDPT NSKALSEKAS LLEELGRYDE AASTYGEILE 840
  841 ITPENREIMY RQGKALEAMG DFEAAIACYD KILALDPKNI DAINNKGFAL SKMEKYQEAL 900
  901 ATYDKALEYD PDNPAAWYFK GCANFAISSN NAALECFNKT VQLKPDCITA WYNKGYLANV 960
  961 LGDVNESINS YESALEIDPD SPSALYNKRF SHYRIKEYDE ASVCKAKLDS LDPDFEAALQ1020
 1021 NRGTRIFIPQ TYRGNLDYPL PMRWYGGEDN VSLNTSTNMT QVSPELNNTS SEPEEEYEEA1080
 1081 YESYTEPDEE GYWYIPEPDE DQNNESPGNE GQKKENDTDN WYVPEPDEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle