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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|167050897, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNGKSQVK FVKYFLILAV CCILLGAASI FGLYKYIEPQ LPDVATLKDI RLQTPMQVYS  60
   61 AEGELIAQFG EKRRIPLTLN QIPPEMVHAF IATEDSRFYD HHGVDPVGIL RAVSIAMLSG 120
  121 RASQGASTIT QQLARNFFLS PERTLMRKIK EAFLAIRIEQ MLTKDEILEL YLNKIYLGYR 180
  181 AYGVGAAAQV YFGKEVHELT LSQIAMIAGL PKAPSTFNPL YSHDRAVARR NVVLLRMLDE 240
  241 KYITQAQYDQ ARSEELVANY HVPQIAFSAP YLAEMVRQEM IKRYGENAYT DGYQVYTTIT 300
  301 RKLQLAAVDS LRANVLAYDM RHGYRGPSNV LWKVGESAWS REQIIDSLKA LPVYGPLLPA 360
  361 VVTEADAAQA TAMLADGSNV TLPMVGIRWA RPFKSDNAQG PVPKKATDVV QPGQQIWVRK 420
  421 VDDNWWLAQV PDVNSALVSI DPNNGAIKAL VGGFDFNQSK FNRATQALRQ VGSNIKPFLY 480
  481 TAAMDKGLTL ATILNDLPIT RWDSGAGTDW RPKNSPPTYD GPIRLRQGLG QSKNVVMVRA 540
  541 MRAMGVDYAA EYLQRFGFPA QNIVHSESLA LGSASFTPLQ LVRGYAVLAN GGYLVDPYFI 600
  601 TKITDDVGNV LFETKPKVVC DNCNLPVIYG DTQRSVVLSD DNIENVATSQ NQNASNVPMP 660
  661 ELEQVTPAQT TLNSEQQYAP HVISTPLAFL MRDALNSNIF GEPGWMGTGW RAGRDLKRKD 720
  721 IGGKTGTTNS SKDAWFSGYG PDTVTSVWIG FDDHRRNLGR STASGAIPDQ ISGAEGGAKT 780
  781 AQPAWNDFMK VALEGLPEKQ VPPPPGIVSV VIDKQTGKLS NGGPGSRSEY FIDGTQPTEH 840
  841 TVHEVGTTLM DNGQTHELF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle