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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22297795, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRIAGGGK GMEQLWHSWQ FRAVVSCLWA PTAAWVIAQP ATARDLQLWR LNPATNQLEI  60
   61 RTERPVQPRA ELVYNPTRLV IDLPGVVLGS PQMSQNYSGA IRQVRVAQFD PQTTRIVVEY 120
  121 AAGFTIDPQQ VRFRGVTANN WLVQLPPPQQ QTVSLPTLAP ASSSSTPAIT PTEPLQIRSW 180
  181 RADGTGFLVF ADRPLSEESY TIRRPRRDRI EILLSNSELI RNFSPRRLEL RRFGRDPIRA 240
  241 EIRAQSNRQV QITLDIDAQD ADWQVIPRND GFVIVPSTTG MTPPPPPRPS VIPAARAQTP 300
  301 ITTIQRVDLG GRELLIQGDR TVFYSVGWEG NRYRIRLRQA QLDSNLRKPR VVTGSPLSNI 360
  361 EFRQEDHQTV SILLTPAPNF RILGPRPLSG ESFVVQIQGV NDSPPSVPTP IDIPPTATTQ 420
  421 PPPQAVPRGR FVVVVDPGHG ASDPGAIGIG GIREKDIVLD ISLQVSQFLQ QQGVQVIMTR 480
  481 TTDIDLDLAP RVAIAERARA NAFVSIHANA ISLARPDVNG LETYFAPGRS SRLATAIHKS 540
  541 ILSSLNIRDR GVRSARFYVI RNTSMDSALV ETGFVTGAED AANFQNPAWR TQMARAIAQG 600
  601 ILNFLNGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle