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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22295969, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMSPLFKK RAVSLGIRYN FLRLPTREKR VSTPASASLT PTGKSYRWNR ERYSKTRRFF  60
   61 DIWFFVWRFL FGRWLLTQSW SYWGGMTDAK RAARRRAQAI WIRETFLDLG PTFIKLGQLF 120
  121 STRADLFPSE YVEELSKLQD RVPAFSYELV TKIIYEDFGR PIPELFRSFD PIPMAAASLG 180
  181 QVHKAQLLSG EEVVVKVQRP GLRQLFDIDL AILKGIAQYF QNHPKWGQGR DWMGIYDECC 240
  241 RILYEEIDYL NEGRNADTFR RNFRDREWAC VPRVYWRYTS RRVLTLEYLP GIKISHYEAL 300
  301 EAAGLDRKRL AELGAKAYLY QVLNDGFFHA DPHPGNIAVS PNGQLIFYDF GMMGRIQPVT 360
  361 RDKLLKTFLS IAQRDAEQVV QCLVELGALV PTGDLGPVRR SIQYLLDNFM NQSFETQSVA 420
  421 QISDDLYEIA YDQPFRFPAT FTFVMRAFST LEGVGKGLDK DFNFMQVAQP FATELMTNGN 480
  481 LPDPSNGSLF SELSRQAAQV GSSAIGLPRR LEEVLDKLEN GDLRLRVRSS ESDRILRRLS 540
  541 NINLGLNYVV LIGSFSLAAT ILFVNQYLLL AGVAAALAVW FGILYWRLML KLDKYEKMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle