YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22778520, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKLIFTLL VALIFLSVFT SPAFASNAET KGNPHHKKVV NVAHRGASGH APENTIAAFD  60
   61 KAFQMKSDFI EIDVQMTADG KLIAIHDTTV NRTTDGTGSV SDYTLEEIQQ LDAGSWFGEE 120
  121 FAGEQIPTFE EILDKYRGKI GILIELKSPE LYPGMEQKVA EALKERNMDK PRNGKIIVQS 180
  181 FNHESVQLSK ELLPRIPHGV LAGMSWADVT GEELEEFATY ADYFNPNMNI ANEDLIDRVH 240
  241 GKDMKMWPYT VRTQEQADRL LDLKVDGIIT DFPEYVHRHP GKN

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	283	0.99