YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148369170, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAAREKDG KAKGSMMGLL AAVAVLTAIA GGGGWYLGNM ISAGQQASAK PSGKEDKPKP  60
   61 GSFESRSIGA VVPLQPIITN LGIPQTTWVR LEASLVAKPG HEIPPAMAAN VSDDFMRFLR 120
  121 SVNLMQLQGA AGLAYLRTDL EERARLRSEG AVDRVFISAL VVE

Type	Start	End	Confidence
Cytoplasmic	1	15	0.88
Transmembrane Helix	16	38	0.88
Non-Cytoplasmic	39	163	0.84