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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24345435, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVYLAIVA LAVILLGLRL WPAQPLSQLM PSSREVLAAD GSLLRLTLAS DGQYRLWQDL  60
   61 EDISPTMIQV MLLKEDRYFY YHLGVNPVAL VRATFATYVD GDRQGGSTLT MQLVRRVYEI 120
  121 NSRSVLGKLE QILAAFWLEA RYSKRELLEA YLNLAPMGGN IEGVGAASQI YFHKVAGELS 180
  181 LSEALSLAVM PQSPARRARF QADFQAARDR LALFWQQTYP DDPRNQGLQV LTALGAERNE 240
  241 LPFKAPHFAR RQLRQDARIV HTTIEPKLQA LLELRIRQYI TSKRHLGVNN ATALLIDTRD 300
  301 QAIKAWVGSA DFFNPMIYGQ VDGVTARRSP GSTLKPFLYA LGLDQGIIHP QSILKDAPMA 360
  361 FGSFEPENFD HRFTGPISAR DALIKSRNLP AVWLAGQLTD PNLYGFLRQA QIFGLRQESH 420
  421 YGLALALGGG ELTMMELGRL YLMLASEGRY YPLRERTEQP INPPSMQLLS PAASFLVLDM 480
  481 LKDNPRADGL PRQGWRVAWK TGTSWGFHDA WSAGVAGPYV LVVWVGNFDA TPNAAFIGAE 540
  541 IAGPLFFNIT DALQASLPST ADRIWAPPNT VKKVNICAES GELPNLWCPK VIEGWFIPGV 600
  601 SPVKVSTLHR PVWVDNQTGM AVCPPYDAQT QHQEIFAFWP SDMASLFEQA GLPRKLAPQL 660
  661 PESCRNAIQL SNIDPVIRSP LKNVTYSLRQ SHLHEHIALL ADAAPDASML YWFVGRDLIG 720
  721 QSLPKQALEW RPSTSGDYKL SVTDDKGRST SLNLNVSILH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle